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Developmental validation of the PowerPlex® 16 HS System: An improved 16-locus fluorescent STR multiplex

Martin G. EnsenbergeraCorresponding Author Informationemail address, Jonelle Thompsona, Becky Hillb, Kristen Homickc, Veronica Kearneyd, Kathleen A. Mayntz-Presse, Paul Mazurc, Amy McGuckianf, Jelena Myersd, Kelli Raleye, Stewart G. Raleye, Robin Rothoveg, Jonathan Wilsonh, Doug Wieczoreka, Patricia M. Fulmera, Douglas R. Stortsa, Benjamin E. Krenkea

Received 4 August 2009; received in revised form 15 September 2009; accepted 2 October 2009. published online 09 November 2009.
Corrected Proof

Abstract 

STR multiplexes remain the cornerstone of genotyping forensic samples. The PowerPlex® 16 HS System contains the core CODIS loci: D3S1358, D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D21S11, CSF1PO, FGA, TH01, TPOX, and vWA. Additional loci amplified in the multiplex reaction are the sex-determinant locus, amelogenin, and two pentanucleotide STR loci, Penta D and Penta E. The PowerPlex® 16 HS System is an updated version of the PowerPlex 16® System; while the primers and dyes remain unchanged, it introduces an enhanced buffer system that includes hot-start Taq DNA polymerase and ensures robust performance. Due to the modification of the reaction mix, a multi-laboratory developmental validation study was completed to document performance capabilities and limitations for the revised assay. Data within this validation was generated by eight laboratories and served as the basis for the following conclusions: genotyping of single-source samples was consistent across a large range of template DNA concentrations with most laboratories obtaining complete profiles at 62.5pg. Mixture analyses showed that over 90% of minor alleles were detected at 1:9 ratios. Optimum amplification cycle number was ultimately dependent on the sensitivity of the detection instrument and could be adjusted to accommodate a range of DNA template concentrations. Reaction conditions including volume and annealing temperature as well as the concentrations of primers, Taq DNA polymerase, and magnesium were shown to be optimal and able to withstand moderate variations without affecting multiplexed STR amplification. Finally, data from non-probative samples and concordance studies showed consistent results when comparing the PowerPlex® 16 HS System with the PowerPlex® 16 System as well as other commercially available systems.

a Promega Corporation, 2800 Woods Hollow Rd., Madison, WI 53711, United States

b National Institute of Standards and Technology, 100 Bureau Dr., M/S 8312, Gaithersburg, MD 20899, United States

c Erie County Central Police Services Forensic Laboratory, 45 Elm St., Buffalo, NY 14203-2600, United States

d Tucson Police Department, 270 S Stone Ave., Tucson, AZ 85701-1917, United States

e Arizona Department of Public Safety, 2102 W. Encanto Blvd., Phoenix, AZ 85009, United States

f Palm Beach County Sheriff's Office, 3228 Gun Club Rd., West Palm Beach, FL 33406, United States

g Missouri State Highway Patrol Crime Laboratory Division, 1510 E. Elm St., Jefferson City, MO 65101, United States

h Tulsa Police Department Forensic Laboratory, 600 Civic Center Dr., Tulsa, OK 74103-3822, United States

Corresponding Author InformationCorresponding author at: Promega Corporation, 2800 Woods Hollow Rd., Madison, WI 53711, United States. Tel.: +1 800 356 9526x4848; fax: +1 608 298 4808.

PII: S1872-4973(09)00156-2

doi:10.1016/j.fsigen.2009.10.007