Typing of 49 autosomal SNPs by SNaPshot® in the Slovenian population
Received 19 November 2009; received in revised form 19 January 2010; accepted 21 January 2010. published online 02 March 2010. Corrected Proof
Abstract
A total of 157 unrelated individuals residing in Slovenia were typed for 49 of the autosomal single nucleotide polymorphisms (SNPs) in the SNPforID 52plex with the SNaPshot® assay. We obtained full SNP profiles in all but one individual and perfect concordance was obtained in duplicated analyses. Allele frequencies are presented for the 49 SNPs. No deviation from HWE was observed for any SNP. FIS and FST were estimated. A principal coordinate analysis performed on six populations (Slovenian, Danish, Somali, Greenland, Turkish and Chinese) showed that the Slovenian population grouped with the Danish population. The mean power of discrimination for the Slovenian population was 1.1×10−19, and the mean exclusion probability for trios was 99.96%.
aFaculty of Criminal Justice and Security, University of Maribor, Kotnikova 8, 1000 Ljubljana, Slovenia
bForensic Science Centre, General Police Directorate, Police, Ministry of the Interior, Slovenia
cSection of Forensic Genetics, Department of Forensic Medicine, Faculty of Health Sciences, University of Copenhagen, 11 Frederik V's Vej, DK-2100 Copenhagen, Denmark
Corresponding author at: Faculty of Criminal Justice and Security, University of Maribor, Kotnikova 8, 1000 Ljubljana, Slovenia. Tel.: +386 142 85426; fax: +386 142 84986.
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