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Announcement of population data| Volume 3, ISSUE 2, e27-e28, March 2009

Hungarian population data for 11 Y-STR and 49 Y-SNP markers

Published:June 19, 2008DOI:https://doi.org/10.1016/j.fsigen.2008.04.006
Hungarian population data for 11 Y-STR and 49 Y-SNP markers
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      Abstract

      49 Y-chromosomal single nucleotide polymorphisms (SNPs) with TaqMan assay and 11 Y-chromosomal STR loci were tested in 215 independent Hungarian male samples. Genetic distances to 23 other populations were calculated based on haplogroup frequencies with AMOVA implemented in Arlequin2.0. Based on distances phylogenetic tree was constructed with Neighbor-joining method using Phylip 3.66. Haplotype and haplogroup diversity values were calculated.

      Keywords

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      References

        • Underhill P.A.
        • Shen P.
        • Lin A.A.
        • Passarino G.
        • Yang W.H.
        • Karuffman E.
        • Bonné-Tamir B.
        • Bertranpetit J.
        • Francalacci P.
        • Ibrahim M.
        • Jenkins T.
        • Kidd J.R.
        • Mehdi S.Q.
        • Seielstad M.T.
        • Wells R.S.
        • Piazza A.
        • Davis R.W.
        • Feldman M.W.
        • Cavalli-Sforza L.L.
        • Oerner P.J.
        Y chromosome sequence variation and the history of human populations.
        Nat. Genet. 2000; 26: 358-361
        View in Article
        • Underhill P.A.
        • Passarino G.
        • Lin A.A.
        • Shen P.
        • Mirazón Lahr M.
        • Foley R.A.
        • Oefner P.J.
        • Cavalli-Sforza L.L.
        The phylogeography of Y chromosome binary haplotypes and the origins of modern human populations.
        Ann. Hum. Genet. 2001; 65: 43-62
        View in Article
        • Hammer M.F.
        • Karafet T.
        • Rasanayagam A.
        • Wood E.T.
        • Altheide T.K.
        • Jenkins T.
        • Griffiths R.C.
        • Templeton A.R.
        • Zegura S.L.
        Out of Africa and back again: nested cladistic analysis of human Y chromosome variation.
        Mol. Biol. Evol. 1998; 15: 427-441
        View in Article
        • Hammer M.F.
        • Karafet T.M.
        • Redd A.J.
        • Jarjanazi H.
        • Santachiara-Benerecetti S.
        • Soodyall H.
        • Zegura S.L.
        Hierarchical patterns of global human Y-chromosome diversity.
        Mol. Biol. Evol. 2001; 18: 1189-1203
        View in Article
        • Karafet T.
        • Xu L.
        • Du R.
        • Wang W.
        • Feng S.
        • Wells R.S.
        • Redd A.J.
        • Zegura S.L.
        • Hammer M.F.
        Paternal population history of East Asia: sources, patterns, and microevolutionary processes.
        Am. J. Hum. Genet. 2001; 69: 615-628
        View in Article
        • Cinnioglu C.
        • King R.
        • Kivisild T.
        • Kalfoglu E.
        • Atasoy S.
        • Cavalleri G.L.
        • Lillie A.S.
        • Roseman C.C.
        • Lin A.A.
        • Prince K.
        • Oefner P.J.
        • Shen P.
        • Semino O.
        • Cavalli-Sforza L.L.
        • Underhill P.A.
        Excavating Y-chromosome haplotype strata in Anatolia.
        Hum. Genet. 2004; 114: 127-148
        View in Article
        • Y Chromosome Consortium (YCC)
        A nomenclature system for the tree of human Y-chromosomal binary haplogroups.
        Genome Res. 2002; 12: 339-348
        View in Article
        • Athey T.W.
        • Nordtvedt K.
        Resolving the placement of haplogroup I-M223 in the Y chromosome phylogenetic tree.
        J. Genet. Genealogy. 2005; 1: 54-55
        View in Article
        • Nei M.
        Analysis of gene diversity in subdivided populations.
        Proc. Natl. Acad. Sci. U.S.A. 1973; 70: 3321-3323
        View in Article
        • Rosser Z.H.
        • Zerjal T.
        • Hurles M.E.
        • Adojaan M.
        • Alavantic D.
        • Amorim A.
        • Amos W.
        • Armenteros M.
        • Arroyo E.
        • Barbujani G.
        • Beckman G.
        • Beckman L.
        • Bertranpetit J.
        • Bosch E.
        • Bradley D.G.
        • Brede G.
        • Cooper G.
        • Côrte-Real H.B.S.M.
        • de Knijff P.
        • Decorte R.
        • Dubrova Y.E.
        • Evgrafov O.
        • Gilissen A.
        • Glisic S.
        • Gölge M.
        • Hill E.W.
        • Jeziorowska A.
        • Kalaydjieva L.
        • Kayser M.
        • Kivisild T.
        • Kravchenko S.A.
        • Krumina A.
        • Kučinskas V.
        • Lavinha J.
        • Livshits L.A.
        • Malaspina P.
        • Maria S.
        • McElreavey K.
        • Meitinger T.A.
        • Mikelsaar A.V.
        • Mitchell R.J.
        • Nafa K.
        • Nicholson J.
        • Nørby S.
        • Pandya A.
        • Parik J.
        • Patsalis P.C.
        • Pereira L.
        • Peterlin B.
        • Pielberg G.
        • Prata M.J.
        • Previderé C.
        • Roewer L.
        • Rootsi S.
        • Rubinsztein D.C.
        • Saillard J.
        • Santos F.R.
        • Stefanescu G.
        • Sykes B.C.
        • Tolun A.
        • Villems R.
        • Tyler-Smith C.
        • Jobling M.A.
        Y-chromosomal diversity in Europe is clinical and influenced primarily by geography, rather than by language.
        Am. J. Hum. Genet. 2000; 67: 1526-1543
        View in Article
        • Semino O.
        • Passarino G.
        • Oefner P.J.
        • Lin A.A.
        • Arbuzova S.
        • Beckman L.E.
        • De Benedictis G.
        • Francalacci P.
        • Kouvatsi A.
        • Limborska S.
        • Marcikiae M.
        • Mika A.
        • Mika B.
        • Primorac D.
        • Santachiara-Benerecetti A.S.
        • Cavalli-Sforza L.L.
        • Underhill P.A.
        The genetic legacy of Paleolithic Homo sapiens in extant Europeans: a Y chromosome perspective.
        Science. 2000; 290: 1155-1159
        View in Article
        • Brandstätter A.
        • Egyed B.
        • Zimmermann B.
        • Duftner N.
        • Padar Z.
        • Parson W.
        Migration rates and genetic structure of two Hungarian ethnic groups in Transylvania, Romania.
        Ann. Hum. Genet. 2007; 71: 791-803
        View in Article
        • Kiss K.É.
        The Syntax of Hungarian.
        Cambridge University Press, Cambridge2002 (pp. 1–2)
        View in Article
        • Lincoln P.
        • Carracedo A.
        Publication of population data of human polymorphisms.
        Forensic Sci. Int. 2000; 110: 3-5
        View in Article

      Article info

      Publication history

      Published online: June 19, 2008
      Accepted: April 29, 2008
      Received in revised form: April 28, 2008
      Received: May 24, 2007

      Identification

      DOI: https://doi.org/10.1016/j.fsigen.2008.04.006

      Copyright

      © 2008 Elsevier Ireland Ltd. Published by Elsevier Inc. All rights reserved.

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