Advertisement
Announcement of population data| Volume 3, ISSUE 4, e137-e138, September 2009

Download started.

Ok

Evaluation of population variation at 17 autosomal STR and 16 Y-STR haplotype loci in Croatians

Published:December 29, 2008DOI:https://doi.org/10.1016/j.fsigen.2008.11.004

      Abstract

      Seventeen autosomal STR loci (D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, VWA, TPOX, D18S51, D5S818, FGA, Penta E and Penta D) and 16 Y-STR haplotype loci (DYS19, DYS385, DYS389I, DYS398II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635 and GATA H4.1) were analyzed in the sample of 200 unrelated Croatians. The agreement with HWE was confirmed for all autosomal STR loci. The combined power of discrimination (PD) and the combined power of exclusion (PE) for the 17 autosomal STR loci were 0.999999999999999999682299331476 and 0.99999995, respectively. Penta E proved to be the most informative autosomal STR locus. Among 200 Croatian males, 197 Y-STR haplotypes were identified and haplotype diversity was estimated at 0.9998 ± 0.0005.

      Keywords

      To read this article in full you will need to make a payment

      Purchase one-time access:

      Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online access
      One-time access price info
      • For academic or personal research use, select 'Academic and Personal'
      • For corporate R&D use, select 'Corporate R&D Professionals'

      Subscribe:

      Subscribe to Forensic Science International: Genetics
      Already a print subscriber? Claim online access
      Already an online subscriber? Sign in
      Institutional Access: Sign in to ScienceDirect

      References

        • Miller S.A.
        • Dykes D.D.
        • Polesky H.F.
        A simple salting out procedure for extracting DNA from human nucleated cells.
        Nucleic Acids Res. 1988; 16: 1215
        • Guo S.W.
        • Thompson E.A.
        Performing the exact test of Hardy–Weinberg proportions for multiple alleles.
        Biometrics. 1992; 48: 361-372
      1. A. Tereba, Tools for analysis of population statistics, Profiles in DNA 3, Promega Corporation, 1999, available at: http://promega.com/geneticidtools/powerstats/.

        • Schneider S.
        • Roessli S.D.
        • Excoffier L.
        A Software for Population Genetics Data Analysis, Arlequin Version 2.000.
        Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland2000
        • Veselinović I.
        • Kubat M.
        • Furač I.
        • Škavić J.
        • Martinović Klarić I.
        • Tasić M.
        Allele frequencies of the 15 AmpF lSTR Identifiler loci in the population of Vojvodina Province, Serbia and Montenegro.
        Int. J. Legal Med. 2004; 118: 184-186
        • Konjhodžić R.
        • Kubat M.
        • Škavić J.
        Bosnian population data for the 15 STR loci in the Power Plex 16 kit.
        Int. J. Legal Med. 2004; 118: 119-121
        • Havaš D.
        • Jeran N.
        • Efremovska Lj.
        • Đorđević D.
        • Rudan P.
        Population genetics of 15 AmpflSTR Identifiler loci in Macedonians and Macedonian Romani (Gypsy).
        Forensic Sci. Int. 2007; 173: 220-224
        • Kubat M.
        • Škavić J.
        • Behluli I.
        • Nuraj B.
        • Bekteshi T.
        • Behluli M.
        • Martinović Klarić I.
        • Peričić M.
        Population genetics of the 15 AmpF lSTR Identifiler loci in Kosovo Albanians.
        Int. J. Legal Med. 2004; 118: 115-118
        • Martinović Klarić I.
        • Barać Lauc L.
        • Peričić M.
        • Janićijević B.
        • Terzić R.
        • Čolak I.
        • Kvesić A.
        • Rudan P.
        Evaluation of Y-STR variation in Bosnian and Herzegovinian populations.
        Forensic Sci. Int. 2005; 154: 252-256
        • Peričić M.
        • Barać Lauc L.
        • Martinović Klarić I.
        • Janićijević B.
        • Behluli I.
        • Rudan P.
        Y chromosome haplotypes in Albanian population from Kosovo.
        Forensic Sci. Int. 2004; 146: 61-64
        • Barać Lauc L.
        • Peričić M.
        • Martinović Klarić I.
        • Šijački A.
        • Popović D.
        • Janićijević B.
        • Rudan P.
        Y chromosome STR polymorphisms in a Serbian population sample.
        Forensic Sci. Int. 2005; 150: 97-101
        • Peričić M.
        • Martinović Klarić I.
        • Barać Lauc L.
        • Janićijević B.
        • Đorđević D.
        • Efremovska Lj.
        • Rudan P.
        Population genetics of 8 Y chromosome STR loci in Macedonians and Macedonian Romani (Gypsy).
        Forensic Sci. Int. 2005; 154: 257-261
        • Jobling M.A.
        • Tyler-Smith C.
        The human Y chromosome: an evolutionary marker comes of age.
        Nature Rev. Genet. 2003; 4: 598-612
        • Lincoln P.
        • Carracedo A.
        Publication of population data of human polymorphisms.
        Forensic Sci. Int. 2000; 110: 3-5
        • Gusmão L.
        • Butler J.M.
        • Carracedo A.
        • Gill P.
        • Kayser M.
        • Mayr W.R.
        • Morling N.
        • Prinz M.
        • Roewer L.
        • Tyler-Smith C.
        • Schneider P.M.
        DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis.
        Forensic Sci. Int. 2006; 157: 187-197