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Research paper| Volume 26, P91-95, January 2017

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Investigator® HDplex (Qiagen) reference population database for forensic use in Argentina

Published:October 18, 2016DOI:https://doi.org/10.1016/j.fsigen.2016.10.009

      Highlights

      • A population analysis was performed on 10 urban populations of Argentina for a set of 12 autosomal STR not studied to date in the country.
      • Population comparisons were carried out observing a relative homogenous allelic frequency distribution across the country with the exception of Jujuy population.
      • Enhanced Power of Discrimination and Power of Exclusion was observed for this marker set compared the 13 STR CODIS loci.
      • The system appeared to be a useful tool to be used as a complement in complex cases.

      Abstract

      Currently, autosomal Short Tandem Repeat (STR) markers represent the method of election in forensic human identification. Commercial kits of most common use nowadays –e.g. PowerPlex®Fusion, Promega Corp.; AmpFlSTR GlobalFiler, Thermofisher scientific; Investigator 24Plex QS,Qiagen-, allow the co-amplification of 23 highly polymorphic STR loci providing a high discrimination power in human identity testing. However, in complex kinship analysis and familial database searches involving distant relationships, additional DNA typing is often required in order to achieve well-founded conclusions. The recently developed kit Investigator® HDplex (Qiagen) co-amplify twelve autosomal STRs markers (D7S1517, D3S1744, D12S391, D2S1360, D6S474, D4S2366, D8S1132, D5S2500, D18S51, D21S2055, D10S2325, SE33), nine of which are not present in the above mentioned kits, providing a set of efficient supplementary markers for human identification purposes. In this study we genotyped a sample of 980 individuals from urban areas of ten Argentinean provinces using the Investigator® HDplex kit, aiming to provide forensic estimates for use in forensic casework and parentage testing in Argentina. We report reference allelic frequency databases for each of the provinces studied as well as for the combined samples. No deviation of Hardy-Weinberg equilibrium was observed. A reasonable discrimination capacity and power of exclusion was estimated which allowed predicting an acceptable forensic behavior of this kit, either to be used as the main STR panel for simple cases or as an auxiliary tool in complex cases. Additionally, population comparison tests showed that the studied samples are relatively homogeneous across the country for these STR set.

      Keywords

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