Advertisement
Correspondence| Volume 26, e28-e30, January 2017

Download started.

Ok

Population data of the 21 autosomal STRs included in the GlobalFiler® kits in population samples from five Brazilian regions

Published:October 25, 2016DOI:https://doi.org/10.1016/j.fsigen.2016.10.017
      The Brazilian population, estimated in approximately 204 million inhabitants by IBGE (data from July 2015) [

      Instituto Brasileiro de Geografia Estatística (IBGE), www.ibge.gov.br.

      ], is considered one of the most admixed in the world, composed mainly by a combination of European, African and Native American ancestries.
      To read this article in full you will need to make a payment

      Purchase one-time access:

      Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online access
      One-time access price info
      • For academic or personal research use, select 'Academic and Personal'
      • For corporate R&D use, select 'Corporate R&D Professionals'

      Subscribe:

      Subscribe to Forensic Science International: Genetics
      Already a print subscriber? Claim online access
      Already an online subscriber? Sign in
      Institutional Access: Sign in to ScienceDirect

      References

      1. Instituto Brasileiro de Geografia Estatística (IBGE), www.ibge.gov.br.

        • Cordeiro Q.
        • Souza B.R.
        • Correa H.
        • Guindalini C.
        • Hutz M.H.
        • Vallada H.
        • Romano-Silva M.A.
        A review of psychiatric genetics research in the Brazilian population.
        Rev. Bras. Psiquiatr. 2009; 31: 154-162
        • Callegari-Jacques S.M.
        • Grattapaglia D.
        • Salzano F.M.
        • Salamoni S.P.
        • Crossetti S.G.
        • Ferreira M.E.
        • Hutz M.H.
        Historical genetics: spatiotemporal analysis of the formation of the Brazilian population.
        Am. J. Hum. Biol. 2003; 15: 824-834
        • Salzano F.M.
        • Bortolini M.C.
        The Evolution and Genetics of Latin American Populations.
        Cambridge University Press, Cambridge2002 (512 pp.)
        • Lins T.C.
        • Vieira R.G.
        • Abreu B.S.
        • Grattapaglia D.
        • Pereira R.W.
        Genetic composition of Brazilian population samples based on a set of twenty-eight ancestry informative SNPs.
        Am. J. Hum. Biol. 2010; 22: 187-192
        • Pena S.D.
        • Di Pietro G.
        • Fuchshuber-Moraes M.
        • Genro J.P.
        • Hutz M.H.
        • et al.
        The genomic ancestry of individuals from different geographical regions of Brazil is more uniform than expected.
        PLoS One. 2011; 6: e17063https://doi.org/10.1371/journal.pone.0017063
        • Manta F.S.N.
        • Pereira R.
        • Vianna R.
        • de Araújo A.R.B.
        • Gitaí D.G.
        • Silva D.A.
        • Wolfgramm E.V.
        • Pontes I.M.
        • Aguiar J.I.
        • Moraes M.O.
        • Carvalho E.F.
        • Gusmão L.
        Revisiting the genetic ancestry of Brazilians using autosomal AIM-Indels.
        PLoS One. 2013; 8: e75145https://doi.org/10.1371/journal.pone.0075145
        • Hares D.R.
        Selection and implementation of expanded CODIS core loci in the United States.
        Forensic Sci. Int. Genet. 2015; 17: 33-34
      2. GlobalFiler™ Express PCR Amplification Kit User’s Guide, Life Technology, Applied Biosystems, Foster City, USA, 2012.

        • Tereba A.
        Tools for Analysis of Population Statistics, Profiles in DNA 3.
        Promega Corporation, USA1999: 14-16
        • Excoffier L.
        • Laval G.
        • Schneider S.
        Arlequin ver. 3.0: an integrated software package for population genetics data analysis.
        Evol. Bioinf. Online. 2005; 1: 47-50
        • Rice W.R.
        Analyzing tables of statistical data.
        Evolution. 1989; 43: 223-225
        • Felsenstein J.
        PHYLIP (Phylogeny Inference Package) Version 3.6.
        Department of Genome Sciences, University of Washington, Seattle2005 (Distributed by the author)
        • Page R.D.M.
        Tree View: an application to display phylogenetic trees on personal computers.
        Comput. Appl. Biosci. 1996; 12: 357-358
        • Aguiar V.R.C.
        • Wolfgramm E.V.
        • Malta F.S.V.
        • Bosque A.G.
        • Mafia A.C.
        • Almeida V.C.O.
        • Caxito F.A.
        • Pardini V.C.
        • Ferreira A.C.S.
        • Louro I.D.
        Updated Brazilian STR allele frequency data using over 100,000 individuals: an analysis of CSF1PO, D3S1358 D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D21S11, FGA, penta D, penta E, TH01, TPOX and vWA loci.
        Forensic Sci. Int. Genet. 2012; 6: 504-509
        • Aguiar V.R.C.
        • Castro A.M.
        • Almeida V.C.O.
        • Malta F.S.V.
        • Ferreira A.C.S.
        • Louro I.D.
        New CODIS core loci allele frequencies for 96,400 Brazilian individuals.
        Forensic Sci. Int. Genet. 2014; 13: e6-e12
        • Almeida C.
        • Ribeiro T.
        • Oliveira A.R.
        • Porto M.J.
        • Santos J.C.
        • Dias D.
        • Dario P.
        Population data of the GlobalFiler Express loci in South Portuguese population.
        Forensic Sci. Int. Genet. 2015; 19: 39-41
        • Coble M.D.
        • Butler J.M.
        Characterization of new MiniSTR loci to aid analysis of degraded DNA.
        J. Forensic Sci. 2005; 50: 43-53
        • Hill C.R.
        • Duewer D.L.
        • Kline M.C.
        • Coble M.D.
        • Butler J.M.
        U.S. population data for 29 autosomal STR loci.
        Forensic Sci. Int. Genet. 2013; 7: e82-e83
        • Raimann P.E.
        • Hirschfeld-Campolongo G.
        • Schumacher S.
        • Almeida S.E.M.
        • Silva C.M.D.
        • Rodenbusch R.
        • Bassini A.S.
        • Souza L.F.
        • Nascimento E.C.S.
        • Oliveira E.S.
        • Santos V.R.D.E.
        • Oliveira E.C.L.
        • Auler-Bittencourt E.A.
        • Hirschfeld-Campolongo R.C.R.
        • Sousa M.L.A.P.O.
        • Figueiredo H.P.
        • Figueiredo B.B.P.
        • Silva R.
        • Moura-Neto R.S.
        Population genetic analyses of the AmpFlSTR® NGM™ in Brazil.
        Int. J. Legal Med. 2012; 126: 337-341
        • Olaisen B.
        • Bär W.
        • Brinkmann B.
        • Budowle B.
        • Carracedo A.
        • Gill P.
        • Lincoln P.
        • Mayr W.R.
        • Rand S.
        DNA recommendations 1997 of the International Society for Forensic Genetics.
        Vox Sang. 1998; 74: 61-63
        • Carracedo A.
        • Butler J.M.
        • Gusmao L.
        • Linacre A.
        • Parson W.
        • Roewer L.
        • Schneider P.M.
        New guidelines for the publication of genetic population data.
        Forensic Sci. Int. Genet. 2013; 7: 217-222