Highlights
- •Mutations in MYBPC, MYH7 and TNNT2 cause hypertrophic cardiomyopathy (HCM).
- •MYBPC3 p.Val158Met was associated with severe left ventricular hypertrophy (LVH).
- •TNNT2 p.Lys263Arg was associated with severe LVH and increased septum thickness.
- •MYH7 p.Val320Met pathogenic variant was associated with early sudden cardiac death (SCD).
- •MYBPC, MYH7 and TNNT2 variants contribute to the risk of SCD and other HCM outcomes.
Abstract
Hypertrophic cardiomyopathy (HCM) is characterized by unexplained left ventricular
hypertrophy (LVH) and is one of the major causes of sudden cardiac death (SCD). An
exon-targeted gene sequencing strategy was used to investigate the association of
functional variants in sarcomeric genes (MYBPC3, MYH7 and TNNT2) with severe LVH and other SCD-related risk factors in Brazilian HCM patients. Clinical
data of 55 HCM patients attending a Cardiology Hospital (Sao Paulo city, Brazil) were
recorded. Severe LVH, aborted SCD, family history of SCD, syncope, non-sustained ventricular
tachycardia and abnormal blood pressure in response to exercise were evaluated as
SCD risk factors. Blood samples were obtained for genomic DNA extraction and the exons
and untranslated regions of the MYH7, MYBPC3 and TNNT2 were sequenced using Nextera® and MiSEq® reagents. Variants were identified and annotated
using in silico tools, and further classified as pathogenic or benign according to the American College
of Medical Genetics and Genomics guidelines. Variants with functional effects were
identified in MYBPC3 (n = 9), MYH7 (n = 6) and TNNT2 (n = 4). The benign variants MYBPC3 p.Val158Met and TNNT2 p.Lys263Arg were associated with severe LVH (p < 0.05), and the MYH7 p.Val320Met (pathogenic) was associated with family history of SCD (p = 0.037). Increased
risk for severe LVH was found in carriers of MYBPC3 Met158 (c.472 A allele, OR = 13.5, 95% CI = 1.80–101.12, p = 0.011) or combined variants
(MYBPC3, MYH7 and TNNT2: OR = 12.39, 95% CI = 2.14–60.39, p = 0.004). Carriers of TNNT2 p.Lys263Arg and combined variants had higher values of septum thickness than non-carriers
(p < 0.05). Molecular modeling analysis showed that MYBPC3 158Met reduces the interaction of cardiac myosin-binding protein C (cMyBP-C) RASK
domain (amino acids Arg215-Ala216-Ser217-Lys218) with tropomyosin. In conclusion,
the variants MYBPC3 p.Val158Met, TNNT2 p.Lys263Arg and MYH7 p.Val320Met individually or combined contribute to the risk of sudden cardiac death
and other outcomes of hypertrophic cardiomyopathy.
Keywords
To read this article in full you will need to make a payment
Purchase one-time access:
Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online accessOne-time access price info
- For academic or personal research use, select 'Academic and Personal'
- For corporate R&D use, select 'Corporate R&D Professionals'
Subscribe:
Subscribe to Forensic Science International: GeneticsAlready a print subscriber? Claim online access
Already an online subscriber? Sign in
Register: Create an account
Institutional Access: Sign in to ScienceDirect
References
- Cardiomyopathy: an overview.Am. Fam. Physician. 2017; 96: 640-646
- Hypertrophic cardiomyopathy: genetics, pathogenesis, clinical manifestations, diagnosis, and therapy.Circ. Res. 2017; 121: 749-770https://doi.org/10.1161/CIRCRESAHA.117.311059
- Syncope and the risk of sudden cardiac death: evaluation, management, and prevention.J. Arrhythm. 2017; 33: 533-544https://doi.org/10.1016/j.joa.2017.07.005
- Risk factors for sudden cardiac death in childhood hypertrophic cardiomyopathy: a systematic review and meta-analysis.Eur. J. Prev. Cardiol. 2017; 24: 1220-1230https://doi.org/10.1177/2047487317702519
- A comparison of whole genome sequencing to multigene panel testing in hypertrophic cardiomyopathy patients.Circ. Cardiovasc. Genet. 2017; 10e001768https://doi.org/10.1161/CIRCGENETICS.117.001768
- Whole genome sequencing improves outcomes of genetic testing in patients with hypertrophic cardiomyopathy.J. Am. Coll. Cardiol. 2018; 72: 419-429https://doi.org/10.1016/j.jacc.2018.04.078
- Investigation of pathogenic genes in chinese sporadic hypertrophic cardiomyopathy patients by whole exome sequencing.Sci. Rep. 2015; 5: 16609https://doi.org/10.1038/srep16609
- Analysis of 51 proposed hypertrophic cardiomyopathy genes from genome sequencing data in sarcomere negative cases has negligible diagnostic yield.Genet. Med. 2019; 21: 1576-1584https://doi.org/10.1038/s41436-018-0375-z
- Coverage and diagnostic yield of whole exome sequencing for the evaluation of cases with dilated and hypertrophic cardiomyopathy.Sci. Rep. 2018; 8: 10846https://doi.org/10.1038/s41598-018-29263-3
- Whole gene sequencing identifies deep-intronic variants with potential functional impact in patients with hypertrophic cardiomyopathy.PLoS One. 2017; 12e0182946https://doi.org/10.1371/journal.pone.0182946
- Advances in the genetic basis and pathogenesis of sarcomere cardiomyopathies.Annu Rev. Genom. Hum. Genet. 2019; 20: 129-153https://doi.org/10.1146/annurev-genom-083118-015306
- TNNT1, TNNT2 and TNNT3: isoform genes, regulation, and structure–function relationships.Gene. 2016; 582: 1-13https://doi.org/10.1016/j.gene.2016.01.006
- Screening of MYH7, MYBPC3 and TNNT2 genes in Brazilian patients with hypertrophic cardiomyopathy.Am. Heart J. 2013; 166: 775-782https://doi.org/10.1016/j.ahj.2013.07.029
- A variant detection pipeline for inherited cardiomyopathy-associated genes using next-generation sequencing.J. Mol. Diagn. 2015; 17: 420-430https://doi.org/10.1016/j.jmoldx.2015.02.003
- Prevalence and phenotypic expression of mutations in the MYH7, MYBPC3 and TNNT2 genes in families with hypertrophic cardiomyopathy in the South of Brazil: a cross-sectional study.Arq. Bras. Cardiol. 2016; 107: 257-265https://doi.org/10.5935/abc.20160133
- Myosin-binding protein C compound heterozygous variant effect on the phenotypic expression of hypertrophic cardiomyopathy.Arq. Bras. Cardiol. 2017; 108: 354-360https://doi.org/10.5935/abc.20170045
- 2011 ACCF/AHA Guideline for the diagnosis and treatment of hypertrophic cardiomyopathy: a report of the American College of Cardiology Foundation/American Heart Association Task Force on practice guidelines.J. Am. Coll. Cardiol. 2011; 58 (Developed in collaboration with the American Association for Thoracic Surgery, American Society of Echocardiography, American Society of Nuclear Cardiology, Heart Failure Society of America, Heart Rhythm Society, Society for Cardiovascular Angiography and Interventions, and Society of Thoracic Surgeons): e212-e260https://doi.org/10.1016/j.jacc.2011.06.011
- 2014 ESC guidelines on diagnosis and management of hypertrophic cardiomyopathy: the Task force for the diagnosis and management of hypertrophic cardiomyopathy of the European Society of Cardiology (ESC).Eur. Heart J. 2014; 35: 2733-2779https://doi.org/10.1093/eurheartj/ehu284
- Clinical course and management of hypertrophic cardiomyopathy.N. Engl. J. Med. 2018; 379: 655-668https://doi.org/10.1056/NEJMra1710575
- The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.Genome Res. 2010; 20: 1297-1303https://doi.org/10.1101/gr.107524.110
- From FastQ data to high‐confidence variant calls: the genome analysis toolkit best practices pipeline.Curr. Protoc. Bioinforma. 2013; 43: 11.10.1-11.10.33https://doi.org/10.1002/0471250953.bi1110s43
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.Nucleic Acids Res. 2010; 38e164https://doi.org/10.1093/nar/gkq603
- Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.Genet Med. 2015; 17: 405-424https://doi.org/10.1038/gim.2015.30
- Adaptation and validation of the ACMG/AMP variant classification framework for MYH7-associated inherited cardiomyopathies: recommendations by ClinGen’s Inherited Cardiomyopathy Expert Panel.Genet Med. 2018; 20: 351-359https://doi.org/10.1038/gim.2017.218
- Computational approaches for identifying potential inhibitors on targeting protein interactions in drug discovery.Adv. Protein Chem. Struct. Biol. 2020; 121: 25-47https://doi.org/10.1016/bs.apcsb.2019.11.013
- Exomic variants of an elderly cohort of Brazilians in the ABraOM database.Hum. Mutat. 2017; 38: 751-763https://doi.org/10.1002/humu.23220
- Phenotypes of hypertrophic cardiomyopathy: genetics, clinics, and modular imaging.Heart Fail Rev. 2020; https://doi.org/10.1007/s10741-020-09931-1
- Clinical outcomes associated with sarcomere mutations in hypertrophic cardiomyopathy: a meta-analysis on 7675 individuals.Clin. Res. Cardiol. 2018; 107: 30-41https://doi.org/10.1007/s00392-017-1155-5
- Novel correlations between the genotype and the phenotype of hypertrophic and dilated cardiomyopathy: results from the German Competence Network Heart Failure.Eur. J. Heart Fail. 2011; 13: 1185-1192https://doi.org/10.1093/eurjhf/hfr074
- Sarcomeric gene mutations in sudden infant death syndrome (SIDS).Forensic Sci. Int. 2012; 219: 278-281https://doi.org/10.1016/j.forsciint.2012.01.018
- Genotype and lifetime burden of disease in hypertrophic cardiomyopathy: insights from the Sarcomeric Human Cardiomyopathy Registry (SHaRe).Circulation. 2018; 138: 1387-1398https://doi.org/10.1161/CIRCULATIONAHA.117.033200
- Early results of sarcomeric gene screening from the Egyptian National BA-HCM Program.J. Cardiovasc. Transl. Res. 2013; 6: 65-80https://doi.org/10.1007/s12265-012-9425-0
- Multiple gene mutations, not the type of mutation, are the modifier of left ventricle hypertrophy in patients with hypertrophic cardiomyopathy.Mol. Biol. Rep. 2013; 40: 3969-3976https://doi.org/10.1007/s11033-012-2474-2
- Distinguishing hypertrophic cardiomyopathy-associated mutations from background genetic noise.J. Cardiovasc. Transl. Res. 2014; 7: 347-361https://doi.org/10.1007/s12265-014-9542-z
- Pathogenic variant burden in the ExAC database: an empirical approach to evaluating population data for clinical variant interpretation.Genome Med. 2017; 9: 13https://doi.org/10.1186/s13073-017-0403-7
- Risk stratification in hypertrophic cardiomyopathy. Insights from genetic analysis and cardiopulmonary exercise testing.J. Clin. Med. 2020; 9: 1636https://doi.org/10.3390/jcm9061636
- Genetic characterization and genotype-phenotype associations in a large cohort of patients with hypertrophic cardiomyopathy – an ancillary study of the Portuguese registry of hypertrophic cardiomyopathy.Int J. Cardiol. 2019; 278: 173-179https://doi.org/10.1016/j.ijcard.2018.12.012
- Unexpectedly low mutation rates in beta-myosin heavy chain and cardiac myosin binding protein genes in italian patients with hypertrophic cardiomyopathy.J. Cell Physiol. 2011; 226: 2894-2900https://doi.org/10.1002/jcp.22636
- High resolution melting: improvements in the genetic diagnosis of hypertrophic cardiomyopathy in a Portuguese cohort.BMC Med. Genet. 2012; 13: 17https://doi.org/10.1186/1471-2350-13-17
- Revealing the mechanism of how cardiac myosin-binding protein C N-terminal fragments sensitize thin filaments for myosin binding.Proc. Natl. Acad. Sci. U. S. A. 2019; 116: 6828-6835https://doi.org/10.1073/pnas.1816480116
- Incident atrial fibrillation is associated with MYH7 sarcomeric gene variation in hypertrophic cardiomyopathy: results from the International Sarcomeric Human Cardiomyopathy Registry.Circ. Heart Fail. 2018; 11e005191https://doi.org/10.1161/CIRCHEARTFAILURE.118.005191
- Genetic basis of cardiomyopathy and the genotypes involved in prognosis and left ventricular reverse remodeling.Sci. Rep. 2018; 8: 1998https://doi.org/10.1038/s41598-018-20114-9
- New population-based exome data are questioning the pathogenicity of previously cardiomyopathy-associated genetic variants.Eur. J. Hum. Genet. 2013; 21: 918-928https://doi.org/10.1038/ejhg.2012.283
- Cardiac troponin and tropomyosin: structural and cellular perspectives to unveil the hypertrophic cardiomyopathy phenotype..Front. Physiol. 2016; 7: 429https://doi.org/10.3389/fphys.2016.00429
- Increased myocardial oxygen consumption precedes contractile dysfunction in hypertrophic cardiomyopathy caused by pathogenic TNNT2 gene variants.J. Am. Heart Assoc. 2020; 9e015316https://doi.org/10.1161/JAHA.119.015316
- Meta-analysis of cardiomyopathy-associated variants in troponin genes identifies loci and intragenic hot spots that are associated with worse clinical outcomes.J. Mol. Cell Cardiol. 2020; 142: 118-125https://doi.org/10.1016/j.yjmcc.2020.04.005
- Clinical predictors of a positive genetic test in hypertrophic cardiomyopathy in the Brazilian population.BMC Cardiovasc. Disord. 2014; 14: 36https://doi.org/10.1186/1471-2261-14-36
- Clinical characteristics and long-term outcome of hypertrophic cardiomyopathy in individuals with a MYBPC3 (Myosin-Binding Protein C) founder mutation.Circ. Cardiovasc. Genet. 2017; 10e001660https://doi.org/10.1161/CIRCGENETICS.116.001660
Article info
Publication history
Published online: February 03, 2021
Accepted:
January 31,
2021
Received in revised form:
January 29,
2021
Received:
November 1,
2020
Identification
Copyright
© 2021 Elsevier B.V. All rights reserved.